BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021G10LP1|AL427816
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1307 1478 0.0
3x_Contig190 254 3e-67
>3x_Contig1307
Length = 7280
Score = 1478 bits (745), Expect = 0.0
Identities = 755/757 (99%), Gaps = 1/757 (0%)
Strand = Plus / Plus
Query: 252 cttcatccccattgttatgcaacataccggaaaaacactttgtgtactcgttgcaagaac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcatccccattgttatgcaacataccggaaaaacactttgtgtactcgttgcaagaac 60
Query: 312 aaaaccatgcagtaacatcaacgtatatgggtttttttgacacttcttcatcaacagatt 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaccatgcagtaacatcaacgtatatgggtttttttgacacttcttcatcaacagatt 120
Query: 372 gtacaattattcgatgaagcgttttagaacgagtttcgagatcgtatagcatattagcca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacaattattcgatgaagcgttttagaacgagtttcgagatcgtatagcatattagcca 180
Query: 432 atcttgaaatatcattatcatttgagtttcgcttagaatgacactgatgtccttctgtcg 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcttgaaatatcattatcatttgagtttcgcttagaatgacactgatgtccttctgtcg 240
Query: 492 gtagacgtgaaccagccacagaattagaagtttcatctatttcagcatcggaacattgaa 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtagacgtgaaccagccacagaattagaagtttcatctatttcagcatcggaacattgaa 300
Query: 552 ctccatcattcaaagccacatcatctatagaatcccacacataaaggaacaagttgtggg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctccatcattcaaagccacatcatctatagaatcccacacataaaggaacaagttgtggg 360
Query: 612 tttcaagaagcgagaaggctttcacaaacaaatcattgggaaataattgataaaggaatg 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttcaagaagcgagaaggctttcacaaacaaatcattgggaaataattgataaaggaatg 420
Query: 672 ccacagttgtgtcatttaatgttcttcctctcccatctacaagctcagagagcaactgag 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccacagttgtgtcatttaatgttcttcctctcccatctacaagctcagagagcaactgag 480
Query: 732 aataattcaaaaatctttcctggccttgtgacatagcatgggacgcctcttttcgtcttc 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aataattcaaaaatctttcctggccttgtgacatagcatgggacgcctcttttcgtcttc 540
Query: 792 tgcctgtttcgcgtttgatttgtggtcgcttcattttataatttttttttgacttttgat 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcctgtttcgcgtttgatttgtggtcgcttcattttataatttttttttgacttttgat 600
Query: 852 attgaccggaaatcatcctggttcgatttttgactgccaattaggcagtgaaggtcaaaa 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attgaccggaaatcatcctggttcgatttttgactgccaattaggcagtgaaggtcaaaa 660
Query: 912 tagatcaacctggcaatgattgagagctgctaaatgtgaagg-atcttttatattcacta 970
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 661 tagatcaacctggcaatgattgagagctgctaaatgtgaaggaatcttttatattcacta 720
Query: 971 tcacaatccaatttcataasatagctatgatatctga 1007
||||||||||||||||||| |||||||||||||||||
Sbjct: 721 tcacaatccaatttcataaaatagctatgatatctga 757
>3x_Contig190
Length = 941
Score = 254 bits (128), Expect = 3e-67
Identities = 147/152 (96%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 1 atctgatggtcaatccacaatattcaaatgtaatttaagccagtcatctttgttatttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atctgatggtcaatccacaatattcaaatgtaatttaagccagtcatctttgttatttat 850
Query: 61 actaaataaagagacactttgtttaacagacgtgaagtactttagaactttcaatgacgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 851 actaaataaagagacactttgtttaacagacgtgaagtactttagaactttcaatggcgt 910
Query: 121 ctgaagcaggattgctgcagccaaaagatgtt 152
||| |||||| ||||||||||||||| ||||
Sbjct: 911 ctggagcagg-gtgctgcagccaaaagttgtt 941
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8674
Number of Sequences: 1807
Number of extensions: 8674
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)